Publications

• Reut Shalgi, Jessica A Hurt, Susan Lindquist and Christopher B Burge. Widespread Inhibition of Posttranscriptional Splicing Shapes the Cellular Transcriptome following Heat Shock. Cell Reports, 2014, June. Pubmed. PDF.
  • Featured in Nature Reviews Molecular Cell Biology: Heat Stresses Splicing, 2014 June.
• Reut Shalgi, Jessica A Hurt, Irina Krykbaeva, Mikko Taipale, Susan Lindquist and Christopher B Burge. Widespread regulation of translation by elongation pausing in heat shock. Molecular Cell, 2013 Feb. Pubmed. PDF.
  • Featured in Nature SMB: Stressed ribosomes take the slow road, 2013 Feb.
  • Featured in Nature Reviews Genetics: Gene regulation: Global translational pausing in response to stress, 2013 Feb.
• Dvir Dahary*, Reut Shalgi* and Yitzhak Pilpel. A likely evolutionary origin of microRNAs in animals. Mol Biol Evol, 2011 May.
  * These authors equally contributed to this work
• Reut Shalgi, Yitzhak Pilpel and Moshe Oren. Repression of transposable-elements – A miRNA anti-cancer defense mechanism. Trends in Genetics, 2010 Jun.
• Roi Avraham, Aldema Sas-Chen, Ohad Manor, Israel Steinfeld, Reut Shalgi, Gabi Tarcic, Ido Amit, Gad Getz, Anne-Lise Børresen-Dale, Yitzhak Pilpel, Zohar Yakhini, Eran Segal and Yosef Yarden. EGF downregulates miRNAs that normally restrain oncogenic transcription factors. Sci Signal, 2010 Jun.
• Reut Shalgi, Ran Brosh, Moshe Oren, Yitzhak Pilpel, and Varda Rotter. Coupling transcriptional and post-transcriptional miRNA regulation in the control of cell fate. Aging, 2009 Sept.
• Nanna R. Christoffersen, Reut Shalgi, Lisa B. Franke, Mikkel Klausen, Yitzhak Pilpel, Finn Cilius Nielsen, Moshe Oren and Anders H. Lund. Differentiation, 2009 Aug.
• Ran Brosh*, Reut Shalgi*, Atar Liran, Gilad Landan, Katya Korotayev, Giang Nguyen, Espen Enerly, Hilde Johnsen, Yosef Buganim, Hilla Solomon, Ido Goldstein, Shalom Madar, Naomi Goldfinger, Anne-Lise Børresen-Dale, Doron Ginsberg, Curtis C. Harris, Yitzhak Pilpel, Moshe Oren and Varda Rotter.p53-repressed miRNAs are Involved with E2F in a Feed Forward Loop Promoting Proliferation. Molecular Systems Biology, 2008 Nov.
  *These authors contributed equally to this work.
• Reut Shalgi, Daniel Lieber, Moshe Oren and Yitzhak Pilpel, Global and local architecture of the mammalian microRNA-transcription factor regulatory network. PLoS Comp. Biol. 2007 Jul.
• Yaguang Xi, Reut Shalgi, Oystein Fodstad,Yitzhak Pilpel, and Jingfang Ju, Differentially Regulated Micro-RNAs and Actively Translated Messenger RNA Transcripts by Tumor Suppressor p53 in Colon Cancer. Clin Cancer Res. 2006 Apr.
• Reut Shalgi, Michal Lapidot, Ron Shamir and Yitzhak Pilpel, A catalog of stability-associated sequence elements in 3′ UTRs of yeast mRNAs.Genome Biology 2005 Sep.